Hello, All.

Today I thought we could do some cleaning up of our seurat object, normalize our data, and then do some dimension reduction/clustering to see what clusters would look like. If this series is helpful or interesting please Like, or if you have suggestions for other videos please let me know.

Project GitHub:
https://github.com/ACSoupir/SpatialTr...

SCTransform Vignette:
https://satijalab.org/seurat/articles...

Dataset:
https://nanostring.com/products/cosmx...

The Seurat image in the thumbnail is from their webpage:
https://satijalab.org/seurat/

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